Journal Publications

2017

Ge, J., S. Huang, and P.R. Jaffé, “Degradation of Tetra and Trichloethylene under Iron Reducing Conditions by Feammox Acidimicrobiaceae sp. A6,” in preparation.

Huang, S., C. Chen, and P.R. Jaffé, “Seasonal and vertical distribution of ammonium oxidizers and denitrifiers in urban river sediments,” submitted.

Huang, S, and P.R. Jaffé, “Isolation and Characterization of the autotrophic, ammonium-oxidizing, iron-reducing, acidophilic: Feammox Acidimicrobiaceae sp. A6,” submitted.

Zhang, Z., H.S. Moon, S. Myneni, and P.R Jaffé, “Phosphate enhanced abiotic and biotic arsenic mobilization in the wetland rhizosphere,” submitted.

Tripathee, R., H.J. Renninger, K. Tomasicchio, J.E. Corbett, B. Mortazavi, P.R. Jaffé, M.C Reid, K.V.R. Schäfer, “Methane emissions along a restoration gradient in temperate mesohaline marshes,” submitted.

Pal, D.S., R. Tripathee, M.C. Reid, K.V.R. Schäfer, and P.R. Jaffé, “Simultaneous Measurements of Dissolved CH4 and H2 in Wetland Soil,” submitted.

Lee, M., C. Jung, E. Shevliakova, S. Malyshev, P.C.D. Milly, H. Han, S. Kim, K. Kim, and P.R. Jaffé, “Control of nitrogen exports from river basins to the coastal ocean: Evaluation of basin management strategies for reducing coastal hypoxia,” submitted.

2016

Pal, D., P.R. Jaffé, “Modeling the Inhibition of Dissolved H2 on Propionate Fermentation and Methanogenesis in Wetland Sediments,” Ecological Modelling, Vol. 322, 2016, pp. 115–123, doi: 10.1016/j.ecolmodel.2015.11.005.

Kaplan, D.I., C. Xu, S. Huang, Y. Lin, N. Tolić, K.M. Roscioli-Johnson, P.H. Santschi, and P.R. Jaffé, “Unique Organic Matter and Microbial Properties in the Rhizosphere of a Wetland Soil,” Environmental Science and Technology, 2016, 50, 4169−4177, doi: 10.1021/acs.est.5b05165.

Huang, S., C. Chen, X. Peng, and P.R. Jaffé, “Environmental Factors Affecting the Presence of Acidimicrobiaceae and Ammonium Removal under Iron-reducing Conditions in Soil Environments,” Soil Biology and Biochemistry, 2016, Vol./Issue 98C, pp. 148-158, doi: 10.1016/j.soilbio.2016.04.012.

Pennino, M., R. McDonald, and P.R. Jaffe, “Watershed-Scale Impacts of Stormwater Green Infrastructure on Hydrology, Nutrient Fluxes, and Combined Sewer Overflows in the Mid-Atlantic Region,” Science of the Total Environment, doi: 10.1016/j.scitotenv.2016.05.101.

Zhang, Z., H.S. Moon, S.B. Myneni, and P.R. Jaffé, “Effect of Dissimilatory Iron and Sulfate Reduction on Arsenic Dynamics in the Wetland Rhizosphere and its Bioaccumulation in Plants,” Journal of Hazardous Materials, doi: 10.1016/j.jhazmat.2016.06.022.

Kaplan, D.I., R. Kukkadapu, J. Seaman, B. Arey, A. Dohnalkova, S. Buttner, D. Li, T. Varga, K.G. Scheckel, P.R. Jaffe, “Iron Mineralogy and Uranium-Binding Environment in the Rhizosphere of a Wetland Soil,” Science of the Total Environment, 2016, Vol. 569–570, pp. 53–64, doi:10.1016/j.scitotenv.2016.06.120.

Lee, M., E. Shevliakova, S. Malyshev, P. C. D. Milly, and P.R. Jaffé, “Climate Variability and Extremes Interacting with Nitrogen Storage Amplify Eutrophication Risk,” Geophysical Research Letters, 2016, doi: 10.1002/2016GL069254/full.

Koster van Groos, P.G., D.I. Kaplan, H. Chang, J.C. Seaman, D. Li, A.D. Peacock, K.G. Scheckel, and P.R. Jaffé, “Uranium fate in wetland mesocosms: Effects of plants at two iron loadings with different pH values,” Chemosphere, 2016, Vol. 163, pp. 116-124, doi: 10.1016/j.chemosphere.2016.08.012.

Kaplan, D.I., S.W. Buettner, D. Li, S. Huang, P.G. Koster van Groos, P.R. Jaffé, and J.C. Seaman, “In situ porewater uranium concentrations in a contaminated wetland: Effect of season and sediment depth,” Applied Geochemistryhttp://dx.doi.org/10.1016/j.apgeochem.2016.11.017.

2015

Huang, S. and P.R. Jaffé, “Characterization of Incubation Experiments and Development of an Enrichment Culture Capable of Ammonium Oxidation under Iron-Reducing Conditions,” Biogeosciences, 2015, 12, 769-779, doi: 10.5194/bg-12-769-2015.

ElBishlawi, H., and P.R. Jaffé, “Characterization of Dissolved Organic Matter from a Restored Urban Marsh and its Role in the Mobilization of Trace Metals,” Chemosphere, 2015, 127, pp. 144–151. doi: 10.1016/j.chemosphere.2014.12.080.

Li, D., D. Kaplan, H. Chang, J. Seaman, P. Jaffe, P. Koster van Groos, K. Scheckel, C. Segre, N. Chen, D.T. Jiang, M. Newville, A. Lanzirotti, “Spectroscopic Evidence of Uranium Immobilization in Acidic Wetlands by Natural Organic Matter and Plant Roots,” Environmental Science and Technology, 2015, 49 (5), pp. 2823–2832, doi: 10.1021/es505369g.

Reid, M.C., D.S. Pal, and P.R. Jaffé, “Dissolved Gas Dynamics in Wetland Soils: In situ Measurements and Modeling of Root-Mediated Gas Exchange and Transport to the Surface,” Water Resources Research, doi: 10.1002/2014WR016803.

Gilson, E., S. Huang, P. Koster van Groos, K. Scheckel, O. Qafoku, A. Peacock, D. Kaplan, P. Jaffe, “Uranium Redistribution due to Water Table Fluctuations in Sandy Wetland Mesocosms,” Environmental Science and Technology, 2015, 49 (20), pp. 12214–12222, doi: 10.1021/acs.est.5b02957.

Gilson, E.R., S. Huang, and P.R. Jaffé, “Biological Reduction of Uranium by Acidimicrobiaceae bacterium A6,” Biodegradation, 2015, Volume 26, Issue 6, pp. 475-482, doi: 10.1007/s10532-015-9749-y.

2014

Li, D., H.S. Chang, J.C. Seaman, P.R. Jaffe, P. Koster van Groos, D.T. Jiang, N. Chen, K.G. Scheckel and D.I. Kaplan, “Retention and Chemical Speciation of Uranium in a Wetland on the Savannah River Site,” Journal of Environmental Radioactivity, 131 (2014) pp. 40-46, doi: 10.1016/j.jenvrad.2013.10.017.

Xiang, A., S. Zhou, B.E. Koel, P.R. Jaffé, “Transport of Poly(Acrylic Acid) Coated 2-Line Ferrihydrite Nanoparticles in Saturated Aquifer Sediments for Environmental Remediation,” Journal of Nanoparticle Research, Vol .16, 2014, 2294, doi: 10.1007/s11051-014-2294-5.

Abbassi, R., A.K. Yadav, S. Huang, and P.R. Jaffé, “Laboratory Study of Nitrification, Denitrification and Anammox Processes in Membrane Bioreactors Considering Periodic Aeration,” Journal of Environmental Management, Vol. 142, 2014, pp. 53-59, doi: 10.1016/j.jenvman.2014.03.013.

Lee, M., S. Malyshev, E. Shevliakova, P. C. D. Milly, and P.R. Jaffé, “Capturing Interactions between Nitrogen and Hydrological Cycles under Historical Climate and Land Use: Susquehanna WatershedAanalysis with the GFDL Land Model LM3-TAN,” Biogeosciences, 11, 2014, 5809-5826, doi: 10.5194/bg-11-5809-2014 (also Biogeosciences Discussions, 11, 5669-5710, doi:10.5194/bgd-11-5669-2014, 2014).

Huang, S., and P.R. Jaffé, “Identification of an Actinobacteria Species Capable to Oxidize Ammonium under Iron Reducing Conditions,” Biogeosciences Discussions, 11, 12295-12321, doi:10.5194/bgd-11-12295-2014, 2014.

Pal, D.S., M.C. Reid, and P.R. Jaffé, “Impact of Hurricane Sandy on CH4 Released from Vegetated and Unvegetated Wetland Microsites,” Environmental Science and Technology Letters, 1, 2014, pp. 372-375, doi: 10.1021/ez5002215.

Chang, H., S. Buettner, J. Seaman, P.R. Jaffé, P. Koster van Groos, D. Li, A. Peacock, K., Scheckel, D. Kaplan, “Uranium Immobilization in an Iron-rich Rhizosphere of a Native Wetland Plant from the Savannah River Site under Reducing Conditions,” Environmental Science and Technology, 2014, 48 (16), pp. 9270–9278. doi: 10.1021/es5015136.

2013

MacDonald, L.H., J.S. Paull, and P.R. Jaffé, “Enhanced Semi-permanent Dialysis Samplers for Long Term Environmental Monitoring in Saturated Sediments,” Environmental Monitoring and Assessment, Vol. 185, No. 5, 2013, pp. 3613-3624, doi: 10.1007/s10661-012-2813-8.

Reid, M.C. and P.R. Jaffé, “A Push-Pull Test to Measure Root Uptake of Volatile Chemicals from Wetland Soils,” Environmental Science and Technology, 2013, 47, 3190-3198,  doi: 10.1021/es304748r.

Dar, S., H. Tan, A. Peacock, P. Jaffe, L. N’Guessan, K. Williams, and S. Strycharz-Glaven, “Spatial Distribution of Geobacteraceae and Sulfate Reducing Bacteria During In Situ Bioremediation of Uranium Contaminated Groundwater,” Remediation Journal, 2013, Vol. 23, No. 2, 31- 49, doi: 10.1002/rem.

Xiang, A., W. Yan, B.E. Koel, P.R Jaffé, “Poly(Acrylic Acid) Coating Induced 2-Line Ferrihydrite Nanoparticle Transport in Saturated Porous Media,” Journal of Nanoparticle Research, 2013, 5:1705, doi: 10.1007/s11051-013-1705-3.

ElBishlawi, H., J.Y. Shin, and P.R. Jaffe, “Trace Metal Immobilization in Sediments of a Newly Constructed and an Established Tidal Brackish Marsh,” Ecological Engineering, Vol. 58, Sep. 2013, pp. 133–141, doi: 10.1016/j.ecoleng.2013.06.018.

Abbassi, R., A.K. Yadav, N. Kumar, S. Huang, P.R. Jaffé, “Modeling and Optimization of Dye Removal using “Green” Clay Supported Iron Nanoparticles,” Ecological Engineering, Vol. 61(A), December 2013, pp. 366-370, doi: 10.1016/j.jenvman.2014.03.013.

Reid, M.C., R. Tripathee, K.V.R. Schäfer, and P. R. Jaffé, “Tidal Marsh Methane Dynamics: Difference in Seasonal Lags in Emissions Driven by Storage in Vegetated vs. Unvegetated Sediments,” Journal of Geophysical Research – Biogeoscience, Vol. 118, No. 4, Dec. 2013, pp. 1802-1813, doi: 10.1002/2013JG002438.

Li, D., H.S. Chang, J.C. Seaman, P.R. Jaffe, P. Koster van Groos, D.T. Jiang, N. Chen, K.G. Scheckel and D.I. Kaplan, “Retention and Chemical Speciation of Uranium in a Wetland on the Savannah River Site,” Journal of Environmental Radioactivity, 131 (2014) pp. 40-46, doi: 10.1016/j.jenvrad.2013.10.017.

2012

Reid, M.C. and P.R. Jaffé, “Gas-phase and Transpiration-driven Mechanisms for Volatilization through Wetland Macrophytes,” Environmental Science and Technology, 2012, 46 (10), pp. 5344–5352, doi: 10.1021/es203297a.

Barlett, M., H.S. Moon, A.D. Peacock, D.B. Hedrick, K.H. Williams, P.E. Long, D. Lovley, and P.R. Jaffé, “Uranium Reduction and Microbial Community Development in Response to Stimulation with Different Electron Donors” Biodegradation, Vol. 23, No 4, 2012, pp. 535-546, doi: 10.1007/s10532-011-9531-8.

Wood, E.F., J.K. Roundy, T.J.Troy, R. van Beek, M. Bierkens, E. Blyth, A. de Roo, P. Döll, M. Ek, J. Famiglietti, D. Gochis, N. van de Giesen, P. Houser, P. Jaffé, S. Kollet, B. Lehner, Dennis P. Lettenmaier, C. Peters-Lidard, M. Sivapalan, J. Sheffield, A. Wade, P. Whitehead. Reply to comment by Keith J. Beven and Hannah L. Cloke on “Hyperresolution global land surface modeling: Meeting a grand challenge for monitoring Earth’s terrestrial water,” Water Resources Research, Vol. 48, W01802, 3 PP., 2012, doi: 10.1029/2011WR011202.

2011

MacDonald, L.H., G. Pathak, B. Singer, P.R. Jaffé, “An Integrated Approach to Address Endemic Fluorosis in Jharkhand, India,” Journal of Water Resource and Protection, Vol. 03, No. 07, 2011, pp. 457-472, doi: 10.4236/jwarp.2011.37056.

Wood, E.F., J.K. Roundy, T.J.Troy, R. van Beek, M. Bierkens, E. Blyth, A. de Roo, P. Döll, M. Ek, J. Famiglietti, D. Gochis, N. van de Giesen, P. Houser, P. Jaffé, S. Kollet, B. Lehner, Dennis P. Lettenmaier, C. Peters-Lidard, M. Sivapalan, J. Sheffield, A. Wade, P. Whitehead, “Hyper-Resolution Global Land Surface Modeling: Meeting a Grand Challenge for Monitoring Earth’s Terrestrial Water,” Water Resources Research, Vol. 47, W05301, 2011, doi: 10.1029/2010WR010090.

Shrestha, J., Clement, J.C., Ehrenfeld, J.G., Jaffé, P.R., “Effects of Vegetation Removal and Urea Application on Iron and Nitrogen Redox Chemistry in Riparian Forested Soils,” Water, Air, & Soil Pollution, Vol. 220, 2011, pp. 213–223, doi: 10.1007/s11270-011-0748-2

Rosenzweig, B.R., J.A. Smith, M.L. Baeck, and P.R. Jaffé, “Monitoring Nitrogen Loading and Retention in an Urban Stormwater Detention Pond,” Journal of Environmental Quality, 2011, Vol. 40, pp. 598-609, doi: 10.2134/jeq2010.0300.

MacDonald, L.H., H.S. Moon, and P.R. Jaffé, “The Role of Biomass, Aqueous Ferrous Iron, and Electron Shuttles in Microbially Mediated Ferrihydrite Reduction,” Water Research, Vol. 45, No 3, 2011, pp. 1049-1062, doi: 10.1016/j.watres.2010.10.017.

2010 and earlier

N’Guessan, A.L., H.S. Moon, A.D. Peacock, H. Tan, M. Sinha, P.E. Long, and P.R. Jaffé, “Post-Biostimulation Microbial Community Structure Changes that Control the Chemical Reoxidation of Reduced Uranium,” FEMS Microbiology Ecology, Vol. 74, 2010, pp. 184–195, doi: 10.1111/j.1574-6941.2010.00933.x.

Moon, H.S., L. McGuiness, R.K. Kukkadapu, A.D. Peacock, J. Komlos, L.J. Kerkhof, P.E. Long, P.R. Jaffé, “Microbial Reduction of Uranium under Iron- and Sulfate-reducing Conditions: Effect of Amended Goethite on Microbial Community Composition and Dynamics,” Water Research, Vol. 44, 2010, pp. 4015-4028, doi: 10.1016/j.watres.2010.05.003.

Shrestha, J., J.R. Rich, J.G. Ehrenfeld, and P.R. Jaffé, “Oxidation of Ammonium to Nitrite under Iron Reducing Conditions in Wetland Soils; Laboratory, Field Demonstrations and Push Pull Rate Determination,” Soil Science, Vol. 174, No. 3, 2009, pp. 156-164, doi: 10.1097/SS.0b013e3181988fbf.

Song, B., E. Chyun, P.R. Jaffé, and B.B. Ward, “Molecular Methods to Detect and Monitor Dissimilatory Arsenate Respiring Bacteria (DARB) in Sediments,” FEMS Microbiology Ecology, Vol. 68, 2009, pp. 108–117, doi: 10.1111/j.1574-6941.2009.00657.x.

Bassein, E. and P. R. Jaffé, “Measuring In Situ Reaction Rate Constants in Wetland Sediments,” Environmental Monitoring and Assessment,” Vol. 159, 2009, pp. 51-62, doi: 10.1007/s10661-008-0612-z.

Moon, H.S., Komlos, J., and P.R. Jaffé, “Biogenic U(IV) Oxidation by Dissolved Oxygen and Nitrate in Sediment   after Prolonged U(VI)/Fe(III)/SO42- Reduction,” Journal of Contaminant Hydrology, Vol. 105, 2009, pp. 18–27, doi: 10.1016/j.jconhyd.2008.10.014.

Komlos, J., H.S. Moon, and P.R. Jaffé, “Effect of Sulfate on the Simultaneous Bioreduction of Iron and Uranium,” Journal of Environmental Quality, Vol. 37, 2008, pp. 2058-2062, doi: 10.2134/jeq2007.0665.

Rosenzweig, B.R., H.S. Moon, J.A. Smith, M.L. Baeck, and P.R. Jaffé, “Variation in the Instream Dissolved Inorganic Nitrogen Response between and within Rainstorm Events in an Urban Watershed,” Journal of Environmental Science and Health, Part A. Toxic/Hazardous Substances and Environmental Engineering, Vol. 43, No. 11,  2008 , pp. 1223-1233, doi: 10.1080/10934520802225190.

Komlos, J., A. Peacock, R.K. Kukkadapu, and P.R. Jaffé, “Long-Term Dynamics of Uranium Reduction/Reoxidation under Low Sulfate Conditions,” Geochim Cosmochim Acta, 72, 2008, pp. 3603–3615, doi: 10.1016/j.gca.2008.05.040.

Zazo, J.A., J.S. Paull, and P.R. Jaffé, “Influence of Plants on the Reduction of Hexavalent Chromium in Wetland Sediments,” Environmental Pollution, March 2008, 156, 2008, pp. 29-35, doi: 10.1016/j.envpol.2008.01.006.

Komlos, J., B. Mishra, A. Lanzirotti, S.C.B. Myneni, and P.R. Jaffé, “Real Time Speciation of Uranium during Active Bioremediation and U(IV) Reoxidation,” J. of Environmental Engineering, ASCE, Vol. 134, No. 2., 2008, pp. 78-86, doi: 10.1061/(ASCE)0733-9372(2008)134:2(78).

Kim, H.S. and P.R. Jaffé, “Degradation of Toluene by a Mixed Population of Archetypal Aerobes, Microaerophiles, and Denitrifiers: Laboratory Sand Column Experiment and Multispecies Biofilm Model Formulation,” Biotechnology and Bioengineering, 2008, Vol. 99, No. 2, pp. 290-301, doi: 10.1002/bit.21574.

Singhal, N., P.R. Jaffé, W. Maier, and E.H. Jho, “The Opposing Effects of Bacterial Activity and Gas Production on Anaerobic TCE Degradation in One-dimensional Soil Columns,” Chemosphere, Volume 69, No. 11, 2007, pp. 1790-179, doi: 10.1016/j.chemosphere.2007.05.049.

Moon, H.S., Komlos, J., and P.R. Jaffé, “Uranium Reoxidation in Previously Bioreduced Sediment by Dissolved Oxygen and Nitrate,” Environmental Science and Technology, Vol. 41, No. 13, 2007, pp. 4587-4592, doi 10.1021/es063063b.

Komlos, J., R. Kukkadapu, J.M. Zachara, and P.R. Jaffé, “Biostimulation of Iron Reduction and Subsequent Oxidation of Sediment Containing Fe-silicates and Fe-oxides: Effect of Redox Cycling on Fe(III) Bioreduction,” Water Research, Vol. 41, 2007, pp. 2996-3004, doi: 10.1016/j.watres.2007.03.019.

Xu, S., P.R. Jaffé, and D.L. Mauzerall, “A Process-Based Model for Methane Emission from Flooded Rice Paddy Systems,”Ecological Modelling., Vol. 205, 2007, pp. 475-491, doi: 10.1016/j.ecolmodel.2007.03.014.

Yabusaki, S.B., Y. Fang, P.E. Long, C.T. Resch, A.D. Peacock, J. Komlos, P.R. Jaffe, S.J. Morrison, R.D. Dayvault, D.C. White, R.T. Anderson, “Uranium Removal from Groundwater via In Situ Biostimulation:  Field-Scale Modeling of Transport and Biological Processes,” Journal of Contaminant Hydrology, Vol. 93, 2007, pp. 216-235, doi: 10.1016/j.jconhyd.2007.02.005.

Kim, H.S. and P.R. Jaffé, “Spatial Distribution and Physiological State of Bacteria in a Sand Column Experiment during the Biodegradation of Toluene,” Water Research, Vol. 41, 2007, pp. 2089-2100, doi: 10.1016/j.watres.2007.02.018.

Choi, J.H., S.S. Park, and P.R. Jaffé, “The Effect of Emerging Macrophytes on the Dynamics of Sulfur Species and Trace Metals in Wetland Sediments,” Environmental Pollution, Vol. 140, No. 2, 2006, pp. 286-293, doi: 10.1016/j.envpol.2005.07.009

Xu, S. and P.R. Jaffé, “Effect of Plants on the Removal of Hexavalent Chromium in Wetland Sediments,” Journal of Environmental Quality, Vol. 35, No.1, 2006, pp. 334-341, doi: 10.2134/jeq2005.0181.

Brown, D.G., and P.R. Jaffé, “Effects of Nonionic Surfactants on the Cell Surface Hydrophobicity and Apparent Hamaker Constant of a Sphingomonas sp.,” Environmental Science and Technology, Vol. 40, No. 1, 2006, pp. 195-201, doi: 10.1021/es051183y.

Choi, J.H., S.S. Park, and P.R. Jaffé, “Simulating the Dynamics of Sulfur Species and Zinc in Wetland Sediments,”Ecological Modelling, Vol 199, 2006, pp. 315-323, doi: 10.1016/j.ecolmodel.2006.05.009.

Clément, J.C., J. Shrestha, J.G. Ehrenfeld, and P.R. Jaffé, “Ammonium Oxidation Coupled to Dissimilatory Iron Reduction under Anaerobic Conditions in Wetland Soils,” Soil Biology and Biochemistry, Vol. 37, No. 12, 2005, pp. 2323-2328, doi: 10.1016/j.soilbio.2005.03.027.

Altevogt, A.S., and P.R. Jaffé, “Modeling the Effects of Gas-Phase CO2 Intrusion on the Biogeochemistry of Variably Saturated Soils,” Water Resources Research, Vol. 41, No. 9, 2005, doi: 10.1029 /2004WR003819

Brown, D.G., J. Komlos, and P.R. Jaffé, “Simultaneous Utilization of Acetate and Hydrogen by Geobacter sulfurreducens and Implications for Use of Hydrogen as an Indicator of Redox Conditions,” Environmental Science and Technology, Vol. 39, No. 9, 2005, pp. 3069-3076, doi: 10.1021/es048613p.

Xu, S., A.C. Leri, S.C.B. Myneni, and P.R. Jaffé, “Uptake of Bromide by two Wetland Plants (Typha latifolia L.and Phragmites australis(Cav.) Trin. ex Steud),” Environmental Science and Technology, Vol. 38, No. 21, 2004, pp. 5642-5648, doi: 10.1021/es049568o.

Komlos, J. and P.R. Jaffé, “Effect of Iron Bioavailability on Dissolved Hydrogen Concentrations during Microbial Iron Reduction,” Biodegradation, Vol. 15, 2004, pp. 315-325, doi: 10.1023/B:BIOD.0000042187.31072.60.

Wang, S., and P.R. Jaffé, “Dissolution of Trace Metals in Potable Aquifers due to CO2 Releases from Deep Formations,” Energy Conversion and Management, Vol. 45, No. 18-19, 2004, pp. 2833-2848, doi: 10.1016/j.enconman.2004.01.002

Kim, H.S., P.R. Jaffé and L.Y. Young, “Simulating Biodegradation of Toluene in Sand-Column Experiments at the Macorscopic and Pore-level Scale for Aerobic and Denitrifying Conditions,” Advances in Water Research, Vol. 27, 2004, pp. 335-348, doi: 10.1016/j.advwatres.2004.02.012.

Wang, S., P.R. Jaffé, G. Li, S.W. Wang, and H.A. Rabitz, “Simulating Bioremediation of Uranium-Contaminated Aquifers; Uncertainty Assessments of Model Parameters,” J. of Contaminant Hydrology, Vol. 64, No 3-4, 2003, pp. 283-307, doi: 10.1016/S0169-7722(02)00230-9

Li, G., S.W. Wang, H. Rabitz, S. Wang, and P. Jaffé “Global Uncertainty Assessments by High Dimensional Model Representations (HDMR),” Chemical Engineering Science, Vol. 57, 2002, pp. 4445-4460, doi: 10.1016/S0009-2509(02)00417-7.

Brown, D.G., J.R. Stencel, and P.R. Jaffé, “Effects of Porous Media Preparation on Bacteria Transport Through Porous Media,” Water Research, Vol. 36, 2002, pp. 105-114, doi: 10.1016/S0043-1354(01)00208-1.

Brown, D.G., and P.R. Jaffé, “Spectrophotometric Assay of POE Nonionic Surfactants and its Application to Surfactant Sorption Isotherms,” Environmental Science and Technology, Vol 35, No 10, 2001, pp. 2022-2025, doi: 10.1021/es001807u.

Brown, D.G., and P.R. Jaffé, “Effects of Nonionic Surfactants on the UV/Visible Absorption of Bacterial Cells,” Biotechnology and Bioengineering, Vol. 74, No 6, 2001, pp. 476-482, doi: 10.1002/bit.1138.

Brown, D.G., and P.R. Jaffé, “Effects of Nonionic Surfactants on Bacterial Transport Through Porous Media,” Environmental Science and Technology, Vol. 35, No. 19, 2001, pp. 3877-3883, doi: 10.1021/es010577w.

Cantu, R., J.R. Stencel, R. Czernuszewicz, P.R. Jaffé, and T.D. Lash, “Surfactant Enhanced Partitioning of Nickel and Vanadium Dexophylloerythroporphyrins from Crude Oil into Water and Their Analysis Using Surface-Enhanced Resonance Raman Spectroscopy,” Environmental Science and Technology, Vol. 34, No. 1, 2000, pp. 192-198, doi: 10.1021/es990213s.

Marshall, J.D., B.W. Shimada, P.R. Jaffé, “Effect of Temporal Variability in Infiltration on Contaminant Transport in the Unsaturated Zone,” Journal of Contaminant Hydrology, Vol. 46, 2000, pp. 151-161, doi: 10.1016/S0169-7722(00)00112-1.

Johnson, J.C., S.Sun, and P.R. Jaffé, “Surfactant Enhanced PCE Dissolution in Porous Media; The Effect on Mass Transfer Rate Coefficients,” Environmental Science and Technology, Vol. 33, No. 8, 1999, pp. 1286-1292, doi: 10.1021/es980908d.

Park, S.S., and P.R. Jaffé, “A Numerical Model to Estimate Sediment Oxygen Levels and Demand,” Journal of Environmental Quality, Vol. 28, 1999, pp. 1219-1226, doi: 10.2134/jeq1999.00472425002800040024x.

Brown, D.G., S. Guha, and P.R. Jaffé, “Surfactant-Enhanced Biodegradation of a PAH in Soil Slurry Reactors,” Bioremediation Journal, Vol. 3, 1999, pp. 269-283, doi: 10.1080/10889869991219361.

Guha, S., C.A. Peters, and P.R. Jaffé, “Multi-Substrate Biodegradation Kinetics of Naphtalene, Phenanthrene and Pyrene Mixtures,” Biotechnology and Bioengineering, Vol. 65, No. 5, 1999, pp. 491-499, doi: 10.1002/(SICI)1097-0290(19991205)65:5<491::AID-BIT1>3.0.CO;2-H.

Guha, S., P.R. Jaffé, and C.A. Peters, “Solubilization of PAH Mixtures by a Non-Ionic Surfactant,” Environmental Science and Technology, Vol. 32, No. 7, 1998, pp. 930-935, doi: 10.1021/es970695c.

Tuck, D.M., B.R. Bierck, and P.R. Jaffé, “Synchrotron Radiation Measurement of Multiphase Fluid Saturation in Porous Media: Experimental Technique and Error Analysis,” J. of Contaminant Hydrology, Vol. 31, No. 3-4, 1998, pp. 21-45, doi: 10.1016/S0169-7722(97)00064-8.

Guha, S., P.R. Jaffé, and C.A. Peters, “Bioavailability of Mixtures of PAHs Partitioned into the Micellar Phase of a Non-ionic Surfactant,” Environmental Science and Technology, Vol. 32, No. 15, 1998, pp. 2317-2324, DOI: 10.1021/es971093w.

Smith, S.L., and P.R. Jaffé, “Modeling the Transport and Reaction of Trace Metals in Water-Saturated Soils and Sediments,”Water Resources Research, Vol. 34, No. 11, 1998, pp. 3135-3147, doi: 10.1029/98WR02227.

Guha, S., and P.R. Jaffé, “Biodegradation Kinetics of Phenanthrene Partitioned into the Micellar-Phase of Non-ionic Surfactants,” Environmental Science and Technology, Vol. 30, No. 2, 1996, pp. 605-611, doi: 10.1021/es950385z.

Guha, S., and P.R. Jaffé, “Bioavailability of Hydrophobic Compounds Partitioned into the Micellar Phase of Nonionic Surfactants,” Environmental Science and Technology, Vol. 30, No. 4, 1996, pp. 1382-1391, doi: 10.1021/es950694p.

Park, S.S., and P.R. Jaffé, “Development of a Redox Potential Model for the Assessment of Postdepositional Heavy Metal Mobility,” Ecological Modelling, Vol.91, No. 1-3, 1996, pp. 169-181, doi: 10.1016/0304-3800(95)00188-3.

MacLeod, C.L., M.D. Borcsik, P.R. and Jaffé, “Effect of Infiltrating Solutions on the Desorption of Mercury from Aquifer Sediments,” Environmental Technology, Vol 17, No. 5, 1996, pp. 465-475, doi: 10.1080/09593331708616408.

Guha, S., and P.R. Jaffé, “Determination of Monod Kinetic Coefficients for Volatile Hydrophobic Organic Compounds,”Biotechnology and Bioengineering, Vol. 50, No. 6, 1996, pp. 693-699, doi: 10.1002/(SICI)1097-0290(19960620)50:6<693::AID-BIT10>3.0.CO;2-G.

Sun, S., and P.R. Jaffé, “Sorption of Phenanthrene from Water onto Alumina Coated with Dianionic Surfactants,” Environmental Science and Technology, Vol. 30, No. 10, 1996, pp. 2906-2913, doi: 10.1021/es950768x.

Park, J.W., and P.R. Jaffé, “Phenanthrene Removal from Soil-Slurries with Surfactant-Treated Oxides,” J. of Environmental Engineering, ASCE, Vol. 121, 1995, pp.430-437, doi: 10.1061/(ASCE)0733-9372(1995)121:6(430).

Imhoff, P.T., and P.R. Jaffé, “Effect of Liquid Distribution on Gas-Water Phase Mass Transfer in Unsaturated Sand During Infiltration,” Journal of Contaminant Hydrology, Vol. 16, 1994, pp. 359-380, doi: 10.1016/0169-7722(94)90044-2.

Smith, J.A., and P.R. Jaffé, “Benzene Transport through Landfill Liners Containing Organophilic Bentonite,” J. of Environmental Engineering, ASCE, Vol. 120, No. 6, November/December 1994, pp. 1559-1577, doi: 10.1061/(ASCE)0733-9372(1994)120:6(1559).

Imhoff, P.T., P.R. Jaffé, and G.F. Pinder, “An Experimental Study of Complete Dissolution of a Nonaqueous Phase Liquid in Saturated Porous Media.” Water Resources Research, Vol. 30, No. 2, 1994, pp. 307-320, DOI: 10.1029/93WR02675.

Smith J.A., and P.R. Jaffé, “Adsorptive Selectivity of Organic-Cation-Modified Bentonite for Nonionic Organic Contaminants,” Water, Air, and Soil Pollution, Vol. 72, 1994, pp. 205-211, doi: 10.1007/BF01257125.

Park, J.W., and P.R. Jaffé, “Partitioning of Three Non-ionic Organic Compounds Between Adsorbed Surfactants, Micelles, and Water,” Environmental Science and Technology, Vol. 27, No.12, 1993, pp. 2559-2565, doi: 10.1021/es00048a038.

Stigliani, W.M., A. Anderberg, and P.R. Jaffé, “Industrial Metabolism and Long-Term Risk from Accumulated Chemicals in the Rhine Basin,” Industry and Environment, UNEP, July-September 1993, link.

Cho, J.H., and P.R. Jaffé, “Simulating the Volatilization of Solvents in Unsaturated Soils during Laboratory and Field Infiltration Experiments,” Water Resources Research, Vol. 29, No. 10, 1993, pp. 3329-3342, doi: 10.1029/93WR01414.

Stigliani, W.M., P.R. Jaffé, and S. Anderberg, “Heavy Metal Pollution in the Rhine Basin,” Environmental Science and Technology, Vol. 27, No. 5, May 1993, pp. 786-792, doi: 10.1021/es00042a001.

Jaffé, P.R., and S.W. Taylor, “Reply on Biofilm Growth and the Related Changes in the Physical Properties of a Porous Medium: Experimental Investigation,” Water Resources Research, Vol. 28, No.5, May 1992, pp. 1483-1484, doi: 10.1029/92WR00245.

Smith, J.A., H.J. Cho, P.R. Jaffé, C.L. MacLeod, and S.A. Koehnlein, “Sampling Unsaturated-Zone Water for Trichloroethylene at Picatinny Arsenal, New Jersey,” J. of Environmental Quality, Vol. 21, April 1992, pp. 264-271, doi: 10.2134/jeq1992.00472425002100020018x.

Smith, J.A., and P.R Jaffé, “Comparison of Tetrachloromethane Sorption to an Alkylammonium-clay and an Alkyldiammonium-clay,” Environmental Science and Technology, Vol. 25, No. 12, December 1991, pp. 2054-2058, doi: 10.1021/es00024a010.

Taylor, S.W., and P.R. Jaffé, “Enhanced In-Situ Biodegradation and Aquifer Permeability Reduction,” J. of Environmental Engineering, ASCE, Vol. 117, No. 1, January 1991, pp. 25-46 doi: 10.1061/(ASCE)0733-9372(1991)117:1(25).

Baek, N.H., P.R. Jaffé, and N. Singhal, “Simulating the Degradation of TCE Under Methanogenesis,” J. of Environmental Science and Health. Part A, Environmental Science and Engineering, Vol. 25, No. 8, December 1990, pp. 987-1005, doi: 10.1080/10934529009375612.

Cho, J.H., and P.R. Jaffé, “The Volatilization of Organic Compounds in Unsaturated Porous Media During Infiltration,” Journal of Contaminant Hydrology, Vol. 6, No. 4, December 1990, pp. 387-410, doi: 10.1016/0169-7722(90)90036-G.

Taylor, S.W., and P.R. Jaffé, “Substrate and Biomass Transport in a Porous Medium,” Water Resources Research, Vol. 26, No. 9, September 1990, pp. 2181-2194, doi: 10.1029/WR026i009p02181.

Taylor, S.W., and P.R. Jaffé, “Biofilm Growth and the Related Changes in Physical Properties of a Porous Media. 3.- Dispersivity,” Water Resources Research, Vol. 26, No. 9, September 1990, pp. 2171-2180, doi: 10.1029/WR026i009p02171.

Taylor, S.W., P.C.D. Milly, and P.R. Jaffé, “Biofilm Growth and the Related Changes in Physical Properties of a Porous Media. 2.- Permeability,” Water Resources Research, Vol. 26, No. 9, September 1990, pp. 2161-2169, doi: 10.1029/WR026i009p02161.

Taylor, S.W., and P.R. Jaffé, “Biofilm Growth and the Related Changes in Physical Properties of a Porous Media. 1.- Experimental Investigation,” Water Resources Research, Vol. 26, No. 9, September 1990, pp. 2153-2159, doi: 10.1029/WR026i009p02153.

Smith, J.A., P.R Jaffé, and C.T. Chiou, “Effect of Ten Quaternary Ammonium Cations on Tetrachloromethane Sorption to Clay From Water,” Environmental Science and Technology, Vol. 24, No 8., August 1990, pp. 1167-1179, doi: 10.1021/es00078a003.

Baek, N.H., and P.R. Jaffé, “The Degradation of Trichloroethylene in Mixed Methanogenic Cultures,” J. of Environmental Quality, Vol. 18, October 1989, pp. 515-518, doi: 10.2134/jeq1989.00472425001800040022x.

Jaffé, P.R., C. Paniconi, and E.F. Wood, “Model Calibration Based on the Naturally Occurring Random Fluctuations of an Environmental System,” J. of Environmental Engineering, ASCE, Vol. 144, No. 5, October 1988, pp. 1136-1145.

Witkowski, P.J., P.R. Jaffé, and R.A Ferrara, “Sorption and Desorption Dynamics of Aroclor 1242 to Natural Sediments,” J. of Contaminant Hydrology, No. 2, 1988, pp. 249-269, doi: 10.1016/0169-7722(88)90025-3.

Jaffé, P.R., “Tropical Eutrophic Lake Modeling and Parameter Discrimination,” Water Resources Bulletin, Vol. 24, No. 3, June 1988, pp. 585-592, doi: 10.1111/j.1752-1688.1988.tb00909.x.

Jaffé, P.R., “Modeling Sorbing Chemicals; Considering the Nonsingular Adsorption/Desorption Isotherm,” J. of Environmental Science and Health. Part A, Environmental Science and Engineering, Vol. 21, No. 1, February 1986, pp. 55-69, doi: 10.1080/10934528609375275.

Jaffé, P.R., and R.A. Ferrara, “Modeling Sediment and Water-Column Interactions for Hydrophobic Pollutants; Parameter Discrimination and Model Response to Input Uncertainty,” Water Research, Vol. 18, No. 9, September 1984, pp. 1169-1174, doi: 10.1016/0043-1354(84)90234-3.

Jaffé, P.R., and F.L. Parker, “Uncertainty Analysis of a First Order Decay Model,” J. of Environmental Engineering, ASCE, Vol. 110, No. 1, February 1984, pp. 131-140, doi: 10.1061/(ASCE)0733-9372(1984)110:1(131).

Jaffé, P.R., and R.A. Ferrara, “Desorption Kinetics in Modeling Toxic Chemicals,” J. of Environmental Engineering, ASCE, Vol. 109, No. 4, August 1983, pp. 859-867, doi: 10.1061/(ASCE)0733-9372(1983)109:4(859).

Eckenfelder, W.W., and P.R. Jaffé, “Effluent Quality Control in the Activated Sludge Process Using Oxygen Uptake Rate,” Environ. Technology Letters, Vol. 3, 1982, pp. 441-448, doi: 10.1080/09593338209384148.

Jaffé, P.R., F.L. Parker, and D.J. Wilson, “Distribution of Toxic Substances in Rivers,” J. of the Environmental Engineering Division, ASCE, Vol. 108, No. EE4, August 1982, pp. 639-649.